PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T3S5X
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 414aa    MW: 46521.4 Da    PI: 8.2941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T3S5XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11346391655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+ l Pk+    +k  s ae+L +Ave+Ik+Lq
  Aradu.T3S5X 346 SIAERVRRTRISERIKKLQGLFPKS----DKQTSTAEMLDLAVEHIKELQ 391
                  689*********************9....788*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.011340390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14342407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.24E-10344395No hitNo description
Gene3DG3DSA:4.10.280.101.0E-12345399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-11346396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-8346391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MSVMYSPVLK YSHGVLRKGH EMISNINHHQ HQDQNHHHQQ QQQQNSRLLR YRSAPSSFLE  60
NLVDINNGGA SVNEDPPLGH GCYHHIPSTS SSSEAMFSKP IQSNNGWSRR DSEPVQVQEE  120
YGGSNNKPTV LKEENGNSSF LKEQNGYPYW TQQIQSLPTN NNGYDGSFGV VNSVNSDHST  180
QSEMGVRSCS NLIRQKSSPA GFFSSENALR EVERFRSNDV SSNRSSSCLK RMPQIAEYEN  240
ESHEGNLVND NGSSKYYVPS FTGEVWDASS FNSQKAASAD EIMFSASTAL ESQDSDFCSQ  300
NLGLIHHLSL LSSSTKMGSM EKFLQLQGTV PCKIRAKRGF ATHPRSIAER VRRTRISERI  360
KKLQGLFPKS DKQTSTAEML DLAVEHIKEL QEQVKMLTNI RSKCRCTNTQ KQYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936790.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A151S3411e-154A0A151S341_CAJCA; Transcription factor bHLH130 family
STRINGGLYMA08G16190.11e-147(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-44bHLH family protein